In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_001627043.2
📊
20 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064034.1 | 15249652 | 15249652 | 0.666666667 | Exon | NC_064034.1 | 15246711 | 15254784 | 8074 | 5132 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15249648 | 15249648 | 0 | Exon | NC_064034.1 | 15246711 | 15254784 | 8074 | 5136 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15249654 | 15249654 | 0 | Exon | NC_064034.1 | 15246711 | 15254784 | 8074 | 5130 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15249655 | 15249655 | 0 | Exon | NC_064034.1 | 15246711 | 15254784 | 8074 | 5129 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15249663 | 15249663 | 0 | Exon | NC_064034.1 | 15246711 | 15254784 | 8074 | 5121 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15252700 | 15252700 | 0 | Promoter (2-3kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | 2084 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15252701 | 15252701 | 0 | Promoter (2-3kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | 2083 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15252714 | 15252714 | 0 | Promoter (2-3kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | 2070 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15255868 | 15255868 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1084 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15255893 | 15255893 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1109 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15255894 | 15255894 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1110 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15255895 | 15255895 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1111 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15255898 | 15255898 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1114 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15256252 | 15256252 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1468 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15256257 | 15256257 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1473 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHH | NC_064034.1 | 15256261 | 15256261 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1477 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHG | NC_064034.1 | 15249660 | 15249660 | 0 | Exon | NC_064034.1 | 15246711 | 15254784 | 8074 | 5124 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHG | NC_064034.1 | 15255884 | 15255884 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1100 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHG | NC_064034.1 | 15255899 | 15255899 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1115 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
| CHG | NC_064034.1 | 15256251 | 15256251 | 0 | Promoter (1-2kb) | NC_064034.1 | 15246711 | 15254784 | 8074 | -1467 | XP_001627043.2 | L-2-hydroxyglutarate dehydrogenase, mitochondrial | JBrowse |
