In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_001629201.2
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8 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064039.1 | 9129528 | 9129528 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 86 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
| CG | NC_064039.1 | 9129539 | 9129539 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 75 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
| CG | NC_064039.1 | 9129548 | 9129548 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 66 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
| CG | NC_064039.1 | 9129560 | 9129560 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 54 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
| CHH | NC_064039.1 | 9129531 | 9129531 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 83 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
| CHH | NC_064039.1 | 9129545 | 9129545 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 69 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
| CHH | NC_064039.1 | 9129553 | 9129553 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 61 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
| CHG | NC_064039.1 | 9129549 | 9129549 | 0 | Promoter (<=1kb) | NC_064039.1 | 9123156 | 9129614 | 6459 | 65 | XP_001629201.2 | ATP-binding cassette sub-family D member 2 | JBrowse |
