In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_001630008.2
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17 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064042.1 | 1204483 | 1204483 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -275 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CG | NC_064042.1 | 1204488 | 1204488 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -270 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CG | NC_064042.1 | 1204492 | 1204492 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -266 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CG | NC_064042.1 | 1205855 | 1205855 | 0 | Promoter (1-2kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | 1097 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204451 | 1204451 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -307 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204467 | 1204467 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -291 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204473 | 1204473 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -285 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204477 | 1204477 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -281 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204486 | 1204486 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -272 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204490 | 1204490 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -268 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204494 | 1204494 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -264 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1204495 | 1204495 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -263 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1206104 | 1206104 | 0 | Promoter (1-2kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | 1346 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHH | NC_064042.1 | 1206108 | 1206108 | 0 | Promoter (1-2kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | 1350 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHG | NC_064042.1 | 1204491 | 1204491 | 0 | Promoter (<=1kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | -267 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHG | NC_064042.1 | 1205868 | 1205868 | 0 | Promoter (1-2kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | 1110 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
| CHG | NC_064042.1 | 1205879 | 1205879 | 0 | Promoter (1-2kb) | NC_064042.1 | 1204758 | 1213161 | 8404 | 1121 | XP_001630008.2 | uncharacterized protein LOC5509482 | JBrowse |
