In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_001635865.2
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3 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_064035.1 | 17199294 | 17199294 | 0 | Intron | NC_064035.1 | 17194760 | 17197760 | 3001 | 4534 | XP_001635865.2 | kinetochore protein Spc25 | JBrowse |
| CHH | NC_064035.1 | 17199305 | 17199305 | 0 | Intron | NC_064035.1 | 17194760 | 17197760 | 3001 | 4545 | XP_001635865.2 | kinetochore protein Spc25 | JBrowse |
| CHG | NC_064035.1 | 17199303 | 17199303 | 0 | Intron | NC_064035.1 | 17194760 | 17197760 | 3001 | 4543 | XP_001635865.2 | kinetochore protein Spc25 | JBrowse |
