In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_001636103.2
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8 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064040.1 | 16784645 | 16784645 | 1 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7654 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
| CG | NC_064040.1 | 16784687 | 16784687 | 1 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7612 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
| CHH | NC_064040.1 | 16784689 | 16784689 | 0 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7610 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
| CHH | NC_064040.1 | 16784757 | 16784757 | 0 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7542 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
| CHH | NC_064040.1 | 16784760 | 16784760 | 0 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7539 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
| CHH | NC_064040.1 | 16784775 | 16784775 | 0 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7524 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
| CHH | NC_064040.1 | 16784778 | 16784778 | 0 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7521 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
| CHG | NC_064040.1 | 16784764 | 16784764 | 0 | Exon | NC_064040.1 | 16781668 | 16792299 | 10632 | 7535 | XP_001636103.2 | uncharacterized protein LOC5516000 | JBrowse |
