In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_001636166.2
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6 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064040.1 | 16491554 | 16491554 | 0 | Exon | NC_064040.1 | 16480901 | 16487805 | 6905 | 10653 | XP_001636166.2 | TATA-box-binding protein 2 | JBrowse |
| CG | NC_064040.1 | 16491558 | 16491558 | 0 | Exon | NC_064040.1 | 16480901 | 16487805 | 6905 | 10657 | XP_001636166.2 | TATA-box-binding protein 2 | JBrowse |
| CHH | NC_064040.1 | 16491543 | 16491543 | 0 | Exon | NC_064040.1 | 16480901 | 16487805 | 6905 | 10642 | XP_001636166.2 | TATA-box-binding protein 2 | JBrowse |
| CHH | NC_064040.1 | 16491544 | 16491544 | 0 | Exon | NC_064040.1 | 16480901 | 16487805 | 6905 | 10643 | XP_001636166.2 | TATA-box-binding protein 2 | JBrowse |
| CHH | NC_064040.1 | 16491550 | 16491550 | 0 | Exon | NC_064040.1 | 16480901 | 16487805 | 6905 | 10649 | XP_001636166.2 | TATA-box-binding protein 2 | JBrowse |
| CHG | NC_064040.1 | 16491518 | 16491518 | 0 | Exon | NC_064040.1 | 16480901 | 16487805 | 6905 | 10617 | XP_001636166.2 | TATA-box-binding protein 2 | JBrowse |
