In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_001640761.2
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10 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_064039.1 | 12882160 | 12882160 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1540 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHH | NC_064039.1 | 12882161 | 12882161 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1541 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHH | NC_064039.1 | 12882165 | 12882165 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1545 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHH | NC_064039.1 | 12882174 | 12882174 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1554 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHH | NC_064039.1 | 12882197 | 12882197 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1577 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHH | NC_064039.1 | 12882214 | 12882214 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1594 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHH | NC_064039.1 | 12882226 | 12882226 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1606 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHG | NC_064039.1 | 12882182 | 12882182 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1562 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHG | NC_064039.1 | 12882200 | 12882200 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1580 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
| CHG | NC_064039.1 | 12882230 | 12882230 | 0 | Promoter (1-2kb) | NC_064039.1 | 12880620 | 12882802 | 2183 | 1610 | XP_001640761.2 | cell growth-regulating nucleolar protein | JBrowse |
