In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_032229762.2
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11 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064044.1 | 5687411 | 5687411 | 1 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2687 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHH | NC_064044.1 | 5687387 | 5687387 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2663 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHH | NC_064044.1 | 5687391 | 5687391 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2667 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHH | NC_064044.1 | 5687392 | 5687392 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2668 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHH | NC_064044.1 | 5687398 | 5687398 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2674 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHH | NC_064044.1 | 5687399 | 5687399 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2675 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHH | NC_064044.1 | 5687403 | 5687403 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2679 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHH | NC_064044.1 | 5687408 | 5687408 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2684 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHG | NC_064044.1 | 5687394 | 5687394 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2670 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHG | NC_064044.1 | 5687400 | 5687400 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2676 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
| CHG | NC_064044.1 | 5687410 | 5687410 | 0 | Promoter (2-3kb) | NC_064044.1 | 5684724 | 5696614 | 11891 | 2686 | XP_032229762.2 | nucleolar RNA helicase 2 | JBrowse |
