In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_032230549.2
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16 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_064046.1 | 3543335 | 3543335 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 8477 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3543337 | 3543337 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 8475 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3543349 | 3543349 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 8463 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3543357 | 3543357 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 8455 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3543358 | 3543358 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 8454 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3543364 | 3543364 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 8448 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3548651 | 3548651 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 3161 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3548655 | 3548655 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 3157 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3548656 | 3548656 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 3156 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3548663 | 3548663 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 3149 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3550354 | 3550354 | 0 | Promoter (1-2kb) | NC_064046.1 | 3532927 | 3551812 | 18886 | 1458 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3552899 | 3552899 | 0 | Promoter (1-2kb) | NC_064046.1 | 3532927 | 3551812 | 18886 | -1087 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3552920 | 3552920 | 0 | Promoter (1-2kb) | NC_064046.1 | 3532927 | 3551812 | 18886 | -1108 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHH | NC_064046.1 | 3552922 | 3552922 | 0 | Promoter (1-2kb) | NC_064046.1 | 3532927 | 3551812 | 18886 | -1110 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHG | NC_064046.1 | 3543359 | 3543359 | 0 | Intron | NC_064046.1 | 3532927 | 3551812 | 18886 | 8453 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
| CHG | NC_064046.1 | 3550355 | 3550355 | 0 | Promoter (1-2kb) | NC_064046.1 | 3532927 | 3551812 | 18886 | 1457 | XP_032230549.2 | alanine--glyoxylate aminotransferase 2, mitochondrial-like | JBrowse |
