In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_032241466.1
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10 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064035.1 | 16882714 | 16882714 | 0 | Intron | NC_064035.1 | 16890557 | 16892373 | 1817 | -7843 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CG | NC_064035.1 | 16891095 | 16891095 | 0 | Promoter (<=1kb) | NC_064035.1 | 16890557 | 16892373 | 1817 | 538 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHH | NC_064035.1 | 16882720 | 16882720 | 0 | Intron | NC_064035.1 | 16890557 | 16892373 | 1817 | -7837 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHH | NC_064035.1 | 16882721 | 16882721 | 0 | Intron | NC_064035.1 | 16890557 | 16892373 | 1817 | -7836 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHH | NC_064035.1 | 16882734 | 16882734 | 0 | Intron | NC_064035.1 | 16890557 | 16892373 | 1817 | -7823 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHH | NC_064035.1 | 16882739 | 16882739 | 0 | Intron | NC_064035.1 | 16890557 | 16892373 | 1817 | -7818 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHH | NC_064035.1 | 16891064 | 16891064 | 0 | Promoter (<=1kb) | NC_064035.1 | 16890557 | 16892373 | 1817 | 507 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHH | NC_064035.1 | 16891065 | 16891065 | 0 | Promoter (<=1kb) | NC_064035.1 | 16890557 | 16892373 | 1817 | 508 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHG | NC_064035.1 | 16882740 | 16882740 | 0 | Intron | NC_064035.1 | 16890557 | 16892373 | 1817 | -7817 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
| CHG | NC_064035.1 | 16891099 | 16891099 | 0 | Promoter (<=1kb) | NC_064035.1 | 16890557 | 16892373 | 1817 | 542 | XP_032241466.1 | uncharacterized protein LOC116620040 | JBrowse |
