In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_032242142.2
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5 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_064043.1 | 3529638 | 3529638 | 0 | Intron | NC_064043.1 | 3513136 | 3539523 | 26388 | 9885 | XP_032242142.2 | ubinuclein-1 isoform X2 | JBrowse |
| CHH | NC_064043.1 | 3529639 | 3529639 | 0 | Intron | NC_064043.1 | 3513136 | 3539523 | 26388 | 9884 | XP_032242142.2 | ubinuclein-1 isoform X2 | JBrowse |
| CHH | NC_064043.1 | 3535317 | 3535317 | 0 | Intron | NC_064043.1 | 3513136 | 3539523 | 26388 | 4206 | XP_032242142.2 | ubinuclein-1 isoform X2 | JBrowse |
| CHG | NC_064043.1 | 3529630 | 3529630 | 0 | Intron | NC_064043.1 | 3513136 | 3539523 | 26388 | 9893 | XP_032242142.2 | ubinuclein-1 isoform X2 | JBrowse |
| CHG | NC_064043.1 | 3529635 | 3529635 | 0 | Intron | NC_064043.1 | 3513136 | 3539523 | 26388 | 9888 | XP_032242142.2 | ubinuclein-1 isoform X2 | JBrowse |
