In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_032243089.2
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8 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064034.1 | 3902348 | 3902348 | 0 | Intron | NC_064034.1 | 3890451 | 3897920 | 7470 | -4428 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
| CHH | NC_064034.1 | 3897735 | 3897735 | 0 | Promoter (<=1kb) | NC_064034.1 | 3890451 | 3897920 | 7470 | 185 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
| CHH | NC_064034.1 | 3902313 | 3902313 | 0 | Intron | NC_064034.1 | 3890451 | 3897920 | 7470 | -4393 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
| CHH | NC_064034.1 | 3902342 | 3902342 | 0 | Intron | NC_064034.1 | 3890451 | 3897920 | 7470 | -4422 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
| CHH | NC_064034.1 | 3902344 | 3902344 | 0 | Intron | NC_064034.1 | 3890451 | 3897920 | 7470 | -4424 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
| CHH | NC_064034.1 | 3902346 | 3902346 | 0 | Intron | NC_064034.1 | 3890451 | 3897920 | 7470 | -4426 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
| CHG | NC_064034.1 | 3902319 | 3902319 | 0 | Intron | NC_064034.1 | 3890451 | 3897920 | 7470 | -4399 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
| CHG | NC_064034.1 | 3902325 | 3902325 | 0 | Intron | NC_064034.1 | 3890451 | 3897920 | 7470 | -4405 | XP_032243089.2 | NIPA-like protein 2 | JBrowse |
