In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_048576366.1
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12 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CG | NC_064035.1 | 9156780 | 9156780 | 0.666666667 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1238 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CG | NC_064035.1 | 9156797 | 9156797 | 1 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1255 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156774 | 9156774 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1232 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156782 | 9156782 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1240 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156783 | 9156783 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1241 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156791 | 9156791 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1249 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156792 | 9156792 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1250 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156800 | 9156800 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1258 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156801 | 9156801 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1259 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHH | NC_064035.1 | 9156802 | 9156802 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1260 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHG | NC_064035.1 | 9156786 | 9156786 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1244 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
| CHG | NC_064035.1 | 9156798 | 9156798 | 0 | Promoter (1-2kb) | NC_064035.1 | 9155542 | 9157194 | 1653 | 1256 | XP_048576366.1 | SOSS complex subunit B1 isoform X2 | JBrowse |
