In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Nematostella vectensis - Whole_adults
The distribution of three methylation motif types in Nematostella vectensis
The distribution of three methylation motif types in different genomic elements in (Whole_adults) in Nematostella vectensis
Query Parameters
Species: Nematostella vectensis •
Stage: •
Tissue: Whole_adults •
Gene: XP_048579782.1
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6 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_064035.1 | 15496247 | 15496247 | 0 | Intron | NC_064035.1 | 15485814 | 15506712 | 20899 | 10433 | XP_048579782.1 | tuftelin-interacting protein 11 isoform X1 | JBrowse |
| CHH | NC_064035.1 | 15496256 | 15496256 | 0 | Intron | NC_064035.1 | 15485814 | 15506712 | 20899 | 10442 | XP_048579782.1 | tuftelin-interacting protein 11 isoform X1 | JBrowse |
| CHH | NC_064035.1 | 15496262 | 15496262 | 0 | Intron | NC_064035.1 | 15485814 | 15506712 | 20899 | 10448 | XP_048579782.1 | tuftelin-interacting protein 11 isoform X1 | JBrowse |
| CHH | NC_064035.1 | 15496294 | 15496294 | 0 | Intron | NC_064035.1 | 15485814 | 15506712 | 20899 | 10480 | XP_048579782.1 | tuftelin-interacting protein 11 isoform X1 | JBrowse |
| CHG | NC_064035.1 | 15496254 | 15496254 | 0 | Intron | NC_064035.1 | 15485814 | 15506712 | 20899 | 10440 | XP_048579782.1 | tuftelin-interacting protein 11 isoform X1 | JBrowse |
| CHG | NC_064035.1 | 15496268 | 15496268 | 0 | Intron | NC_064035.1 | 15485814 | 15506712 | 20899 | 10454 | XP_048579782.1 | tuftelin-interacting protein 11 isoform X1 | JBrowse |
