In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074605937.1
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37 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133892.1 | 2629995 | 2629995 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 894 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630003 | 2630003 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 902 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630010 | 2630010 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 909 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630033 | 2630033 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 932 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630034 | 2630034 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 933 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630035 | 2630035 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 934 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630041 | 2630041 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 940 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630049 | 2630049 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 948 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630057 | 2630057 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 956 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630058 | 2630058 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 957 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630059 | 2630059 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 958 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630065 | 2630065 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 964 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630066 | 2630066 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 965 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630074 | 2630074 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 973 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630081 | 2630081 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 980 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630089 | 2630089 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 988 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630092 | 2630092 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 991 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630094 | 2630094 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 993 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630097 | 2630097 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 996 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630109 | 2630109 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1008 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630113 | 2630113 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1012 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630118 | 2630118 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1017 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630124 | 2630124 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1023 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630132 | 2630132 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1031 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630135 | 2630135 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1034 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630136 | 2630136 | 0.333333333333333 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1035 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630137 | 2630137 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1036 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630139 | 2630139 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1038 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHH | NC_133892.1 | 2630142 | 2630142 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1041 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHG | NC_133892.1 | 2630001 | 2630001 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 900 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHG | NC_133892.1 | 2630019 | 2630019 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 918 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHG | NC_133892.1 | 2630026 | 2630026 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 925 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CHG | NC_133892.1 | 2630112 | 2630112 | 0.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1011 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CG | NC_133892.1 | 2630006 | 2630006 | 1.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 905 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CG | NC_133892.1 | 2630018 | 2630018 | 1.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 917 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CG | NC_133892.1 | 2630025 | 2630025 | 1.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 924 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
| CG | NC_133892.1 | 2630127 | 2630127 | 1.0 | Promoter | NC_133892.1 | 2629101 | 2631668 | 2568 | 1026 | XP_074605937.1 | indoleamine 2,3-dioxygenase 2-like | JBrowse |
