In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074607178.1
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12 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133893.1 | 4723121 | 4723121 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12336 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHH | NC_133893.1 | 4723138 | 4723138 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12353 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHH | NC_133893.1 | 4723150 | 4723150 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12365 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHH | NC_133893.1 | 4723178 | 4723178 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12393 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHH | NC_133893.1 | 4723183 | 4723183 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12398 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHH | NC_133893.1 | 4723185 | 4723185 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12400 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHH | NC_133893.1 | 4723200 | 4723200 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12415 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHG | NC_133893.1 | 4723132 | 4723132 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12347 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHG | NC_133893.1 | 4723148 | 4723148 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12363 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CHG | NC_133893.1 | 4723205 | 4723205 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12420 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CG | NC_133893.1 | 4723119 | 4723119 | 0.333333333333333 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12334 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
| CG | NC_133893.1 | 4723162 | 4723162 | 0.0 | Exon | NC_133893.1 | 4710785 | 4722797 | 12013 | 12377 | XP_074607178.1 | uncharacterized protein LOC141860097 isoform X1 | JBrowse |
