In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074608550.1
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16 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133894.1 | 18577986 | 18577986 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2478 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18577988 | 18577988 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2476 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18577999 | 18577999 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2465 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578017 | 18578017 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2447 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578019 | 18578019 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2445 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578020 | 18578020 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2444 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578032 | 18578032 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2432 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578037 | 18578037 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2427 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578040 | 18578040 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2424 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578043 | 18578043 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2421 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578051 | 18578051 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2413 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHH | NC_133894.1 | 18578058 | 18578058 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2406 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHG | NC_133894.1 | 18578021 | 18578021 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2443 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CHG | NC_133894.1 | 18578061 | 18578061 | 0.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2403 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CG | NC_133894.1 | 18577969 | 18577969 | 1.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2495 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
| CG | NC_133894.1 | 18578035 | 18578035 | 1.0 | Promoter | NC_133894.1 | 18573859 | 18580464 | 6606 | 2429 | XP_074608550.1 | protein CFAP276-like isoform X1 | JBrowse |
