In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074609176.1
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26 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133894.1 | 4983698 | 4983698 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5821 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983714 | 4983714 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5805 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983715 | 4983715 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5804 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983717 | 4983717 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5802 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983718 | 4983718 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5801 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983738 | 4983738 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5781 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983746 | 4983746 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5773 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983757 | 4983757 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5762 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983777 | 4983777 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5742 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983779 | 4983779 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5740 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983782 | 4983782 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5737 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983790 | 4983790 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5729 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983794 | 4983794 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5725 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983803 | 4983803 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5716 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983807 | 4983807 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5712 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983816 | 4983816 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5703 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983852 | 4983852 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5667 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983853 | 4983853 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5666 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983860 | 4983860 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5659 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983872 | 4983872 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5647 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHH | NC_133894.1 | 4983890 | 4983890 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5629 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHG | NC_133894.1 | 4983676 | 4983676 | 0.666666666666667 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5843 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHG | NC_133894.1 | 4983769 | 4983769 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5750 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CHG | NC_133894.1 | 4983839 | 4983839 | 0.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5680 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CG | NC_133894.1 | 4983735 | 4983735 | 1.0 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5784 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
| CG | NC_133894.1 | 4983801 | 4983801 | 0.666666666666667 | Intron | NC_133894.1 | 4973048 | 4989519 | 16472 | 5718 | XP_074609176.1 | protein kinase C delta type-like | JBrowse |
