In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074609588.1
📊
15 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133894.1 | 6003361 | 6003361 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 562 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003386 | 6003386 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 537 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003429 | 6003429 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 494 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003431 | 6003431 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 492 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003435 | 6003435 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 488 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003443 | 6003443 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 480 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003444 | 6003444 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 479 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003447 | 6003447 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 476 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003480 | 6003480 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 443 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHH | NC_133894.1 | 6003492 | 6003492 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 431 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHG | NC_133894.1 | 6003486 | 6003486 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 437 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CHG | NC_133894.1 | 6003493 | 6003493 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 430 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CG | NC_133894.1 | 6003365 | 6003365 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 558 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CG | NC_133894.1 | 6003416 | 6003416 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 507 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
| CG | NC_133894.1 | 6003483 | 6003483 | 0.0 | Promoter | NC_133894.1 | 6001729 | 6003923 | 2195 | 440 | XP_074609588.1 | uncharacterized protein LOC141863802 | JBrowse |
