In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074610052.1
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8 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133894.1 | 17016780 | 17016780 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20420 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
| CHH | NC_133894.1 | 17016789 | 17016789 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20411 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
| CHH | NC_133894.1 | 17016810 | 17016810 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20390 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
| CHH | NC_133894.1 | 17016830 | 17016830 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20370 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
| CHH | NC_133894.1 | 17016850 | 17016850 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20350 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
| CHG | NC_133894.1 | 17016769 | 17016769 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20431 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
| CHG | NC_133894.1 | 17016827 | 17016827 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20373 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
| CHG | NC_133894.1 | 17016834 | 17016834 | 0.0 | Distal Intergenic | NC_133894.1 | 17037200 | 17042419 | 5220 | -20366 | XP_074610052.1 | DELTA-actitoxin-Afr1a-like | JBrowse |
