In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074610115.1
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33 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133894.1 | 6860516 | 6860516 | 0.333333333333333 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1389 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860517 | 6860517 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1388 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860521 | 6860521 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1384 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860533 | 6860533 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1372 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860551 | 6860551 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1354 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860572 | 6860572 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1333 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860586 | 6860586 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1319 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860592 | 6860592 | 0.333333333333333 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1313 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860621 | 6860621 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1284 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860625 | 6860625 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1280 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860628 | 6860628 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1277 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860631 | 6860631 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1274 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860639 | 6860639 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1266 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860640 | 6860640 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1265 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860644 | 6860644 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1261 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860657 | 6860657 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1248 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860662 | 6860662 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1243 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860668 | 6860668 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1237 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860671 | 6860671 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1234 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860681 | 6860681 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1224 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860685 | 6860685 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1220 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860686 | 6860686 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1219 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860690 | 6860690 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1215 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860694 | 6860694 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1211 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860698 | 6860698 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1207 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHH | NC_133894.1 | 6860712 | 6860712 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1193 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHG | NC_133894.1 | 6860527 | 6860527 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1378 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHG | NC_133894.1 | 6860602 | 6860602 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1303 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CHG | NC_133894.1 | 6860716 | 6860716 | 0.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1189 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CG | NC_133894.1 | 6850266 | 6850266 | 0.0 | Exon | NC_133894.1 | 6853014 | 6861905 | 8892 | 11639 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CG | NC_133894.1 | 6860519 | 6860519 | 0.666666666666667 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1386 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CG | NC_133894.1 | 6860523 | 6860523 | 1.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1382 | XP_074610115.1 | centromere protein K-like | JBrowse |
| CG | NC_133894.1 | 6860595 | 6860595 | 1.0 | Promoter | NC_133894.1 | 6853014 | 6861905 | 8892 | 1310 | XP_074610115.1 | centromere protein K-like | JBrowse |
