In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074610195.1
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25 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133894.1 | 19602952 | 19602952 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5446 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19602955 | 19602955 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5449 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603015 | 19603015 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5509 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603016 | 19603016 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5510 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603031 | 19603031 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5525 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603038 | 19603038 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5532 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603052 | 19603052 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5546 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603053 | 19603053 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5547 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603059 | 19603059 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5553 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603064 | 19603064 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5558 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603069 | 19603069 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5563 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603072 | 19603072 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5566 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603082 | 19603082 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5576 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603088 | 19603088 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5582 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603107 | 19603107 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5601 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603116 | 19603116 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5610 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603124 | 19603124 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5618 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603125 | 19603125 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5619 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHH | NC_133894.1 | 19603127 | 19603127 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5621 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHG | NC_133894.1 | 19603047 | 19603047 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5541 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CHG | NC_133894.1 | 19603110 | 19603110 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5604 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CG | NC_133894.1 | 19602943 | 19602943 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5437 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CG | NC_133894.1 | 19603084 | 19603084 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5578 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CG | NC_133894.1 | 19603114 | 19603114 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5608 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
| CG | NC_133894.1 | 19603131 | 19603131 | 0.0 | Distal Intergenic | NC_133894.1 | 19597506 | 19600614 | 3109 | 5625 | XP_074610195.1 | tubulin alpha chain-like | JBrowse |
