In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074610380.1
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25 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133894.1 | 1787652 | 1787652 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3153 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787655 | 1787655 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3150 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787660 | 1787660 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3145 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787662 | 1787662 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3143 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787667 | 1787667 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3138 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787669 | 1787669 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3136 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787687 | 1787687 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3118 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787708 | 1787708 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3097 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787710 | 1787710 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3095 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1787718 | 1787718 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3087 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1788267 | 1788267 | 0.0 | Promoter | NC_133894.1 | 1786767 | 1790805 | 4039 | 2538 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1788268 | 1788268 | 0.0 | Promoter | NC_133894.1 | 1786767 | 1790805 | 4039 | 2537 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHH | NC_133894.1 | 1788281 | 1788281 | 0.0 | Promoter | NC_133894.1 | 1786767 | 1790805 | 4039 | 2524 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1787641 | 1787641 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3164 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1787681 | 1787681 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3124 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1787686 | 1787686 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3119 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1787713 | 1787713 | 0.0 | Intron | NC_133894.1 | 1786767 | 1790805 | 4039 | 3092 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1787752 | 1787752 | 0.0 | Exon | NC_133894.1 | 1786767 | 1790805 | 4039 | 3053 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1787757 | 1787757 | 0.0 | Exon | NC_133894.1 | 1786767 | 1790805 | 4039 | 3048 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1787765 | 1787765 | 0.0 | Exon | NC_133894.1 | 1786767 | 1790805 | 4039 | 3040 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1788277 | 1788277 | 0.0 | Promoter | NC_133894.1 | 1786767 | 1790805 | 4039 | 2528 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CHG | NC_133894.1 | 1788290 | 1788290 | 0.0 | Promoter | NC_133894.1 | 1786767 | 1790805 | 4039 | 2515 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CG | NC_133894.1 | 1787790 | 1787790 | 1.0 | Exon | NC_133894.1 | 1786767 | 1790805 | 4039 | 3015 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CG | NC_133894.1 | 1788264 | 1788264 | 1.0 | Promoter | NC_133894.1 | 1786767 | 1790805 | 4039 | 2541 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
| CG | NC_133894.1 | 1788286 | 1788286 | 1.0 | Promoter | NC_133894.1 | 1786767 | 1790805 | 4039 | 2519 | XP_074610380.1 | ras-related protein rab7 | JBrowse |
