In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074611977.1
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9 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133883.1 | 25245794 | 25245794 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2792 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245796 | 25245796 | 0.333333333333333 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2794 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245798 | 25245798 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2796 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245806 | 25245806 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2804 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245808 | 25245808 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2806 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245809 | 25245809 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2807 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245814 | 25245814 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2812 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245820 | 25245820 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2818 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
| CHH | NC_133883.1 | 25245822 | 25245822 | 0.0 | Promoter | NC_133883.1 | 25243002 | 25263581 | 20580 | 2820 | XP_074611977.1 | nucleolysin TIAR-like | JBrowse |
