In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074613016.1
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13 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 29572728 | 29572728 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4033 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHH | NC_133882.1 | 29572733 | 29572733 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4038 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHH | NC_133882.1 | 29572751 | 29572751 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4056 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHH | NC_133882.1 | 29572752 | 29572752 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4057 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHH | NC_133882.1 | 29572753 | 29572753 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4058 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHH | NC_133882.1 | 29572757 | 29572757 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4062 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHH | NC_133882.1 | 29572779 | 29572779 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4084 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHH | NC_133882.1 | 29572781 | 29572781 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4086 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHG | NC_133882.1 | 29572702 | 29572702 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4007 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHG | NC_133882.1 | 29572707 | 29572707 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4012 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHG | NC_133882.1 | 29572723 | 29572723 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4028 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CHG | NC_133882.1 | 29572730 | 29572730 | 0.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4035 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
| CG | NC_133882.1 | 29572777 | 29572777 | 1.0 | Intron | NC_133882.1 | 29568695 | 29582238 | 13544 | 4082 | XP_074613016.1 | dual specificity protein kinase TTK-like isoform X1 | JBrowse |
