In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074613609.1
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3 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHG | NC_133883.1 | 4577948 | 4577948 | 0.0 | Intron | NC_133883.1 | 4567880 | 4582023 | 14144 | 10068 | XP_074613609.1 | protein CIP2A-like isoform X1 | JBrowse |
| CHG | NC_133883.1 | 4577951 | 4577951 | 0.0 | Intron | NC_133883.1 | 4567880 | 4582023 | 14144 | 10071 | XP_074613609.1 | protein CIP2A-like isoform X1 | JBrowse |
| CG | NC_133883.1 | 4577963 | 4577963 | 0.0 | Intron | NC_133883.1 | 4567880 | 4582023 | 14144 | 10083 | XP_074613609.1 | protein CIP2A-like isoform X1 | JBrowse |
