In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074613611.1
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17 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133883.1 | 4404664 | 4404664 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8002 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404670 | 4404670 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8008 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404671 | 4404671 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8009 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404685 | 4404685 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8023 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404700 | 4404700 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8038 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404716 | 4404716 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8054 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404718 | 4404718 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8056 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404724 | 4404724 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8062 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404733 | 4404733 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8071 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHH | NC_133883.1 | 4404734 | 4404734 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8072 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CHG | NC_133883.1 | 4404703 | 4404703 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8041 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CG | NC_133883.1 | 4404674 | 4404674 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8012 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CG | NC_133883.1 | 4404682 | 4404682 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8020 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CG | NC_133883.1 | 4404711 | 4404711 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8049 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CG | NC_133883.1 | 4404726 | 4404726 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8064 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CG | NC_133883.1 | 4404728 | 4404728 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8066 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
| CG | NC_133883.1 | 4404747 | 4404747 | 0.0 | Intron | NC_133883.1 | 4396662 | 4401783 | 5122 | 8085 | XP_074613611.1 | mannosyl-oligosaccharide glucosidase-like | JBrowse |
