In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074614963.1
📊
36 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133883.1 | 15004978 | 15004978 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1097 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15004980 | 15004980 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1095 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005014 | 15005014 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1061 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005020 | 15005020 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1055 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005021 | 15005021 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1054 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005022 | 15005022 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1053 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005024 | 15005024 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1051 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005031 | 15005031 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1044 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005044 | 15005044 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1031 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005045 | 15005045 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1030 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005063 | 15005063 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1012 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005087 | 15005087 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 988 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005097 | 15005097 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 978 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005098 | 15005098 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 977 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005100 | 15005100 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 975 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005102 | 15005102 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 973 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005109 | 15005109 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 966 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005111 | 15005111 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 964 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005115 | 15005115 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 960 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005122 | 15005122 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 953 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005128 | 15005128 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 947 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHH | NC_133883.1 | 15005144 | 15005144 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 931 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15004965 | 15004965 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1110 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15004968 | 15004968 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1107 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15004981 | 15004981 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1094 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15004986 | 15004986 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1089 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15004996 | 15004996 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1079 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005008 | 15005008 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1067 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005011 | 15005011 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1064 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005027 | 15005027 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1048 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005032 | 15005032 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1043 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005067 | 15005067 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 1008 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005080 | 15005080 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 995 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005091 | 15005091 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 984 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005134 | 15005134 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 941 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
| CHG | NC_133883.1 | 15005145 | 15005145 | 0.0 | Promoter | NC_133883.1 | 15004600 | 15006075 | 1476 | 930 | XP_074614963.1 | large ribosomal subunit protein uL14m-like | JBrowse |
