In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074615240.1
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12 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133883.1 | 20968360 | 20968360 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1941 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968365 | 20968365 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1936 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968377 | 20968377 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1924 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968386 | 20968386 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1915 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968388 | 20968388 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1913 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968391 | 20968391 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1910 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968394 | 20968394 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1907 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968405 | 20968405 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1896 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968419 | 20968419 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1882 | XP_074615240.1 | heparanase-like | JBrowse |
| CHH | NC_133883.1 | 20968420 | 20968420 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1881 | XP_074615240.1 | heparanase-like | JBrowse |
| CHG | NC_133883.1 | 20968362 | 20968362 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1939 | XP_074615240.1 | heparanase-like | JBrowse |
| CHG | NC_133883.1 | 20968413 | 20968413 | 0.0 | Promoter | NC_133883.1 | 20960480 | 20970301 | 9822 | 1888 | XP_074615240.1 | heparanase-like | JBrowse |
