In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074615381.1
📊
2 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHG | NC_133883.1 | 7534692 | 7534692 | 0.666666666666667 | Intron | NC_133883.1 | 7528871 | 7538463 | 9593 | 5821 | XP_074615381.1 | WASH complex subunit 3-like | JBrowse |
| CG | NC_133883.1 | 7534686 | 7534686 | 1.0 | Intron | NC_133883.1 | 7528871 | 7538463 | 9593 | 5815 | XP_074615381.1 | WASH complex subunit 3-like | JBrowse |
