In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074615569.1
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23 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133883.1 | 21428135 | 21428135 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2071 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428140 | 21428140 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2076 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428141 | 21428141 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2077 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428145 | 21428145 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2081 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428152 | 21428152 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2088 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428161 | 21428161 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2097 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428162 | 21428162 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2098 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428163 | 21428163 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2099 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428173 | 21428173 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2109 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428175 | 21428175 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2111 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428180 | 21428180 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2116 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428182 | 21428182 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2118 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428190 | 21428190 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2126 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428255 | 21428255 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2191 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHH | NC_133883.1 | 21428276 | 21428276 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2212 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHG | NC_133883.1 | 21428118 | 21428118 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2054 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHG | NC_133883.1 | 21428124 | 21428124 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2060 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHG | NC_133883.1 | 21428176 | 21428176 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2112 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHG | NC_133883.1 | 21428185 | 21428185 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2121 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHG | NC_133883.1 | 21428196 | 21428196 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2132 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHG | NC_133883.1 | 21428246 | 21428246 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2182 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CHG | NC_133883.1 | 21428277 | 21428277 | 0.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2213 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
| CG | NC_133883.1 | 21428166 | 21428166 | 1.0 | Promoter | NC_133883.1 | 21422630 | 21426064 | 3435 | -2102 | XP_074615569.1 | myosin regulatory light chain 12A-like | JBrowse |
