In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074615805.1
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13 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133884.1 | 4599749 | 4599749 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4081 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHH | NC_133884.1 | 4599755 | 4599755 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4087 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHH | NC_133884.1 | 4599756 | 4599756 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4088 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHH | NC_133884.1 | 4599757 | 4599757 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4089 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHH | NC_133884.1 | 4599759 | 4599759 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4091 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHH | NC_133884.1 | 4599764 | 4599764 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4096 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHH | NC_133884.1 | 4599770 | 4599770 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4102 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHH | NC_133884.1 | 4599771 | 4599771 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4103 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHG | NC_133884.1 | 4599745 | 4599745 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4077 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHG | NC_133884.1 | 4599752 | 4599752 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4084 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHG | NC_133884.1 | 4599760 | 4599760 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4092 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CHG | NC_133884.1 | 4599773 | 4599773 | 0.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4105 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
| CG | NC_133884.1 | 4599740 | 4599740 | 1.0 | Intron | NC_133884.1 | 4595668 | 4597800 | 2133 | 4072 | XP_074615805.1 | cytochrome c oxidase subunit 4 isoform 2, mitochondrial-like | JBrowse |
