In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074615935.1
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21 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133884.1 | 26231458 | 26231458 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2101 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231479 | 26231479 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2122 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231505 | 26231505 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2148 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231527 | 26231527 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2170 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231529 | 26231529 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2172 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231537 | 26231537 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2180 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231541 | 26231541 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2184 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231542 | 26231542 | 0.25 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2185 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231544 | 26231544 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2187 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231555 | 26231555 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2198 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231569 | 26231569 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2212 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231570 | 26231570 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2213 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHH | NC_133884.1 | 26231583 | 26231583 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2226 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHG | NC_133884.1 | 26231522 | 26231522 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2165 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHG | NC_133884.1 | 26231584 | 26231584 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2227 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CHG | NC_133884.1 | 26231602 | 26231602 | 0.25 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2245 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CG | NC_133884.1 | 26231455 | 26231455 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2098 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CG | NC_133884.1 | 26231465 | 26231465 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2108 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CG | NC_133884.1 | 26231503 | 26231503 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2146 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CG | NC_133884.1 | 26231549 | 26231549 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2192 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
| CG | NC_133884.1 | 26231564 | 26231564 | 0.0 | Promoter | NC_133884.1 | 26217137 | 26229357 | 12221 | -2207 | XP_074615935.1 | aldehyde dehydrogenase, dimeric NADP-preferring-like | JBrowse |
