In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074616969.1
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26 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133884.1 | 23231551 | 23231551 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7396 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231553 | 23231553 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7394 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231563 | 23231563 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7384 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231576 | 23231576 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7371 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231579 | 23231579 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7368 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231580 | 23231580 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7367 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231584 | 23231584 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7363 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231595 | 23231595 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7352 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231597 | 23231597 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7350 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231619 | 23231619 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7328 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231620 | 23231620 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7327 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231640 | 23231640 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7307 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231641 | 23231641 | 0.333333333333333 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7306 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231659 | 23231659 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7288 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231686 | 23231686 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7261 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231688 | 23231688 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7259 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHH | NC_133884.1 | 23231689 | 23231689 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7258 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHG | NC_133884.1 | 23231556 | 23231556 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7391 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHG | NC_133884.1 | 23231573 | 23231573 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7374 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHG | NC_133884.1 | 23231625 | 23231625 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7322 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHG | NC_133884.1 | 23231637 | 23231637 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7310 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CHG | NC_133884.1 | 23231653 | 23231653 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7294 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CG | NC_133884.1 | 23231545 | 23231545 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7402 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CG | NC_133884.1 | 23231612 | 23231612 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7335 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CG | NC_133884.1 | 23231623 | 23231623 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7324 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
| CG | NC_133884.1 | 23231638 | 23231638 | 0.0 | Intron | NC_133884.1 | 23226164 | 23238947 | 12784 | 7309 | XP_074616969.1 | cation channel sperm-associated protein 4-like | JBrowse |
