In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074618236.1
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29 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133884.1 | 444193 | 444193 | 0.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3936 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444205 | 444205 | 0.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3948 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444210 | 444210 | 0.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3953 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444216 | 444216 | 0.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3959 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444238 | 444238 | 0.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3981 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444239 | 444239 | 0.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3982 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444244 | 444244 | 0.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3987 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444245 | 444245 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -3988 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444255 | 444255 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -3998 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444258 | 444258 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4001 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444279 | 444279 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4022 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444281 | 444281 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4024 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444282 | 444282 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4025 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444327 | 444327 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4070 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444328 | 444328 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4071 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444330 | 444330 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4073 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444339 | 444339 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4082 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444350 | 444350 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4093 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHH | NC_133884.1 | 444352 | 444352 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4095 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHG | NC_133884.1 | 444273 | 444273 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4016 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHG | NC_133884.1 | 444278 | 444278 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4021 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHG | NC_133884.1 | 444293 | 444293 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4036 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHG | NC_133884.1 | 444302 | 444302 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4045 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CHG | NC_133884.1 | 444314 | 444314 | 0.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4057 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CG | NC_133884.1 | 444214 | 444214 | 1.0 | Intron | NC_133884.1 | 437328 | 440257 | 2930 | -3957 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CG | NC_133884.1 | 444270 | 444270 | 1.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4013 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CG | NC_133884.1 | 444307 | 444307 | 1.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4050 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CG | NC_133884.1 | 444320 | 444320 | 1.0 | Exon | NC_133884.1 | 437328 | 440257 | 2930 | -4063 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
| CG | NC_133884.1 | 444370 | 444370 | 1.0 | 3' UTR | NC_133884.1 | 437328 | 440257 | 2930 | -4113 | XP_074618236.1 | ribosome-binding factor A-like | JBrowse |
