In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074618477.1
📊
31 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 19854043 | 19854043 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1193 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854050 | 19854050 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1186 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854062 | 19854062 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1174 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854076 | 19854076 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1160 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854079 | 19854079 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1157 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854088 | 19854088 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1148 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854095 | 19854095 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1141 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854096 | 19854096 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1140 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854097 | 19854097 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1139 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854102 | 19854102 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1134 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854106 | 19854106 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1130 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854107 | 19854107 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1129 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854125 | 19854125 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1111 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854134 | 19854134 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1102 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854139 | 19854139 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1097 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854146 | 19854146 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1090 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854157 | 19854157 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1079 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854159 | 19854159 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1077 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854164 | 19854164 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1072 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854177 | 19854177 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1059 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854200 | 19854200 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1036 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHH | NC_133882.1 | 19854231 | 19854231 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1005 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHG | NC_133882.1 | 19853989 | 19853989 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1247 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHG | NC_133882.1 | 19854090 | 19854090 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1146 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHG | NC_133882.1 | 19854122 | 19854122 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1114 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHG | NC_133882.1 | 19854211 | 19854211 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1025 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CHG | NC_133882.1 | 19854214 | 19854214 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1022 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CG | NC_133882.1 | 19854010 | 19854010 | 1.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1226 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CG | NC_133882.1 | 19854186 | 19854186 | 0.666666666666667 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1050 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CG | NC_133882.1 | 19854202 | 19854202 | 0.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1034 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
| CG | NC_133882.1 | 19854220 | 19854220 | 1.0 | Promoter | NC_133882.1 | 19852062 | 19855236 | 3175 | 1016 | XP_074618477.1 | surfeit locus protein 4 homolog | JBrowse |
