In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074618896.1
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25 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133884.1 | 16443409 | 16443409 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -7011 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443413 | 16443413 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -7007 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443416 | 16443416 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -7004 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443421 | 16443421 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6999 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443448 | 16443448 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6972 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443450 | 16443450 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6970 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443464 | 16443464 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6956 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443470 | 16443470 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6950 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443491 | 16443491 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6929 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443512 | 16443512 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6908 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443521 | 16443521 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6899 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443532 | 16443532 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6888 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443538 | 16443538 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6882 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHH | NC_133884.1 | 16443543 | 16443543 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6877 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHG | NC_133884.1 | 16443427 | 16443427 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6993 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHG | NC_133884.1 | 16443433 | 16443433 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6987 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CHG | NC_133884.1 | 16443520 | 16443520 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6900 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443400 | 16443400 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -7020 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443426 | 16443426 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6994 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443435 | 16443435 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6985 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443440 | 16443440 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6980 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443468 | 16443468 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6952 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443475 | 16443475 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6945 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443494 | 16443494 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6926 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
| CG | NC_133884.1 | 16443500 | 16443500 | 0.0 | Distal Intergenic | NC_133884.1 | 16450420 | 16458457 | 8038 | -6920 | XP_074618896.1 | zinc finger TRAF-type-containing protein 1-like | JBrowse |
