In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074619191.1
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25 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133885.1 | 1375999 | 1375999 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3148 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376002 | 1376002 | 0.333333333333333 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3145 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376011 | 1376011 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3136 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376012 | 1376012 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3135 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376032 | 1376032 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3115 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376034 | 1376034 | 0.333333333333333 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3113 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376062 | 1376062 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3085 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376064 | 1376064 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3083 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376065 | 1376065 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3082 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376066 | 1376066 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3081 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376068 | 1376068 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3079 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376075 | 1376075 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3072 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376077 | 1376077 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3070 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376103 | 1376103 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3044 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376125 | 1376125 | 0.0 | Exon | NC_133885.1 | 1362914 | 1379147 | 16234 | 3022 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHH | NC_133885.1 | 1376126 | 1376126 | 0.0 | Exon | NC_133885.1 | 1362914 | 1379147 | 16234 | 3021 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376009 | 1376009 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3138 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376021 | 1376021 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3126 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376031 | 1376031 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3116 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376047 | 1376047 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3100 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376074 | 1376074 | 0.0 | Intron | NC_133885.1 | 1362914 | 1379147 | 16234 | 3073 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376115 | 1376115 | 0.0 | Exon | NC_133885.1 | 1362914 | 1379147 | 16234 | 3032 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376119 | 1376119 | 0.0 | Exon | NC_133885.1 | 1362914 | 1379147 | 16234 | 3028 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CHG | NC_133885.1 | 1376132 | 1376132 | 0.0 | Exon | NC_133885.1 | 1362914 | 1379147 | 16234 | 3015 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
| CG | NC_133885.1 | 1376144 | 1376144 | 1.0 | Exon | NC_133885.1 | 1362914 | 1379147 | 16234 | 3003 | XP_074619191.1 | gem-associated protein 5-like isoform X2 | JBrowse |
