In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074619269.1
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26 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133885.1 | 14276486 | 14276486 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4159 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276494 | 14276494 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4167 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276495 | 14276495 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4168 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276496 | 14276496 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4169 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276577 | 14276577 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4250 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276585 | 14276585 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4258 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276598 | 14276598 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4271 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276599 | 14276599 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4272 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276606 | 14276606 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4279 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276607 | 14276607 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4280 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276610 | 14276610 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4283 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276624 | 14276624 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4297 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276627 | 14276627 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4300 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276643 | 14276643 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4316 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276651 | 14276651 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4324 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276652 | 14276652 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4325 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276659 | 14276659 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4332 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHH | NC_133885.1 | 14276690 | 14276690 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4363 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHG | NC_133885.1 | 14276566 | 14276566 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4239 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHG | NC_133885.1 | 14276616 | 14276616 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4289 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHG | NC_133885.1 | 14276640 | 14276640 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4313 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHG | NC_133885.1 | 14276661 | 14276661 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4334 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CHG | NC_133885.1 | 14276675 | 14276675 | 0.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4348 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CG | NC_133885.1 | 14276563 | 14276563 | 1.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4236 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CG | NC_133885.1 | 14276668 | 14276668 | 1.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4341 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
| CG | NC_133885.1 | 14276700 | 14276700 | 1.0 | Intron | NC_133885.1 | 14268824 | 14272327 | 3504 | -4373 | XP_074619269.1 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like isoform X1 | JBrowse |
