In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Upperside_Treatment_4
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Upperside_Treatment_4) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Upperside_Treatment_4 •
Gene: XP_074619702.1
📊
8 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133885.1 | 2566720 | 2566720 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7896 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
| CHH | NC_133885.1 | 2566726 | 2566726 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7890 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
| CHH | NC_133885.1 | 2566744 | 2566744 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7872 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
| CHG | NC_133885.1 | 2566714 | 2566714 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7902 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
| CHG | NC_133885.1 | 2566732 | 2566732 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7884 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
| CHG | NC_133885.1 | 2566754 | 2566754 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7862 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
| CHG | NC_133885.1 | 2566760 | 2566760 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7856 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
| CHG | NC_133885.1 | 2566765 | 2566765 | 0.0 | Exon | NC_133885.1 | 2569136 | 2574616 | 5481 | 7851 | XP_074619702.1 | uncharacterized protein LOC141878620 isoform X2 | JBrowse |
