In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074620522.1
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11 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133885.1 | 23208390 | 23208390 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 450 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CHH | NC_133885.1 | 23208391 | 23208391 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 449 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CHH | NC_133885.1 | 23208398 | 23208398 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 442 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CHH | NC_133885.1 | 23208401 | 23208401 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 439 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CHH | NC_133885.1 | 23208405 | 23208405 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 435 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CHG | NC_133885.1 | 23208382 | 23208382 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 458 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CHG | NC_133885.1 | 23208385 | 23208385 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 455 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CHG | NC_133885.1 | 23208415 | 23208415 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 425 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CG | NC_133885.1 | 23208371 | 23208371 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 469 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CG | NC_133885.1 | 23208376 | 23208376 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 464 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
| CG | NC_133885.1 | 23208403 | 23208403 | 0.0 | Promoter | NC_133885.1 | 23192889 | 23208840 | 15952 | 437 | XP_074620522.1 | NAD(P) transhydrogenase, mitochondrial-like | JBrowse |
