In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074620653.1
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10 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133885.1 | 12784183 | 12784183 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19743 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHH | NC_133885.1 | 12784190 | 12784190 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19736 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHH | NC_133885.1 | 12784192 | 12784192 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19734 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHH | NC_133885.1 | 12784202 | 12784202 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19724 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHH | NC_133885.1 | 12784204 | 12784204 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19722 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHH | NC_133885.1 | 12784207 | 12784207 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19719 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHG | NC_133885.1 | 12784173 | 12784173 | 0.333333333333333 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19753 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHG | NC_133885.1 | 12784186 | 12784186 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19740 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CHG | NC_133885.1 | 12784209 | 12784209 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19717 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
| CG | NC_133885.1 | 12784210 | 12784210 | 0.0 | Intron | NC_133885.1 | 12802290 | 12803926 | 1637 | 19716 | XP_074620653.1 | uncharacterized protein LOC141879311 | JBrowse |
