In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074620950.1
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20 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 7992567 | 7992567 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -773 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992573 | 7992573 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -779 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992580 | 7992580 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -786 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992581 | 7992581 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -787 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992582 | 7992582 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -788 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992584 | 7992584 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -790 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992604 | 7992604 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -810 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992608 | 7992608 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -814 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992614 | 7992614 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -820 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992619 | 7992619 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -825 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992621 | 7992621 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -827 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992629 | 7992629 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -835 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992630 | 7992630 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -836 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHH | NC_133882.1 | 7992631 | 7992631 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -837 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CHG | NC_133882.1 | 7992570 | 7992570 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -776 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 7992600 | 7992600 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -806 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 7992602 | 7992602 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -808 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 7992617 | 7992617 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -823 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 7992623 | 7992623 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -829 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
| CG | NC_133882.1 | 7992626 | 7992626 | 0.0 | Promoter | NC_133882.1 | 7966118 | 7991794 | 25677 | -832 | XP_074620950.1 | scavenger receptor cysteine-rich type 1 protein M160-like isoform X2 | JBrowse |
