In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074621014.1
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14 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133885.1 | 21214405 | 21214405 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11450 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHH | NC_133885.1 | 21214414 | 21214414 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11441 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHH | NC_133885.1 | 21214424 | 21214424 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11431 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHH | NC_133885.1 | 21214440 | 21214440 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11415 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHH | NC_133885.1 | 21214441 | 21214441 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11414 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHH | NC_133885.1 | 21214442 | 21214442 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11413 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHH | NC_133885.1 | 21214443 | 21214443 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11412 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHH | NC_133885.1 | 21214445 | 21214445 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11410 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHG | NC_133885.1 | 21214411 | 21214411 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11444 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHG | NC_133885.1 | 21214420 | 21214420 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11435 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHG | NC_133885.1 | 21214433 | 21214433 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11422 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CHG | NC_133885.1 | 21214436 | 21214436 | 0.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11419 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CG | NC_133885.1 | 21214417 | 21214417 | 1.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11438 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
| CG | NC_133885.1 | 21214451 | 21214451 | 1.0 | Intron | NC_133885.1 | 21205618 | 21225855 | 20238 | 11404 | XP_074621014.1 | uncharacterized protein LOC141879639 isoform X3 | JBrowse |
