In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074621291.1
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38 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133885.1 | 12732539 | 12732539 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1386 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732541 | 12732541 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1388 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732543 | 12732543 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1390 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732545 | 12732545 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1392 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732550 | 12732550 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1397 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732554 | 12732554 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1401 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732556 | 12732556 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1403 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732582 | 12732582 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1429 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732583 | 12732583 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1430 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732591 | 12732591 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1438 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732593 | 12732593 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1440 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732594 | 12732594 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1441 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732601 | 12732601 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1448 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732602 | 12732602 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1449 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732609 | 12732609 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1456 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732634 | 12732634 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1481 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732648 | 12732648 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1495 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732672 | 12732672 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1519 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732679 | 12732679 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1526 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732681 | 12732681 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1528 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732686 | 12732686 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1533 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732689 | 12732689 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1536 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732692 | 12732692 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1539 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732698 | 12732698 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1545 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732699 | 12732699 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1546 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732704 | 12732704 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1551 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732708 | 12732708 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1555 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732721 | 12732721 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1568 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732727 | 12732727 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1574 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHH | NC_133885.1 | 12732729 | 12732729 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1576 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHG | NC_133885.1 | 12732558 | 12732558 | 0.333333333333333 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1405 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHG | NC_133885.1 | 12732576 | 12732576 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1423 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHG | NC_133885.1 | 12732611 | 12732611 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1458 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHG | NC_133885.1 | 12732617 | 12732617 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1464 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CHG | NC_133885.1 | 12732736 | 12732736 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1583 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CG | NC_133885.1 | 12732559 | 12732559 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1406 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CG | NC_133885.1 | 12732618 | 12732618 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1465 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
| CG | NC_133885.1 | 12732696 | 12732696 | 0.0 | Promoter | NC_133885.1 | 12728952 | 12731153 | 2202 | -1543 | XP_074621291.1 | F-box/LRR-repeat protein 8-like | JBrowse |
