In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074621372.1
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43 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133882.1 | 3875981 | 3875981 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3302 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3875982 | 3875982 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3303 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3875995 | 3875995 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3316 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3875999 | 3875999 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3320 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876000 | 3876000 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3321 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876003 | 3876003 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3324 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876004 | 3876004 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3325 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876007 | 3876007 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3328 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876024 | 3876024 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3345 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876041 | 3876041 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3362 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876044 | 3876044 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3365 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876051 | 3876051 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3372 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876054 | 3876054 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3375 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876077 | 3876077 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3398 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876081 | 3876081 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3402 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876087 | 3876087 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3408 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876098 | 3876098 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3419 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876102 | 3876102 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3423 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876131 | 3876131 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3452 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876141 | 3876141 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3462 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876158 | 3876158 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3479 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876159 | 3876159 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3480 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876161 | 3876161 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3482 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHH | NC_133882.1 | 3876169 | 3876169 | 0.333333333333333 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3490 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3875971 | 3875971 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3292 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3875985 | 3875985 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3306 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3875998 | 3875998 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3319 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876018 | 3876018 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3339 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876027 | 3876027 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3348 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876040 | 3876040 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3361 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876050 | 3876050 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3371 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876072 | 3876072 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3393 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876096 | 3876096 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3417 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876113 | 3876113 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3434 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876135 | 3876135 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3456 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876149 | 3876149 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3470 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876156 | 3876156 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3477 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CHG | NC_133882.1 | 3876179 | 3876179 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3500 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CG | NC_133882.1 | 3875992 | 3875992 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3313 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CG | NC_133882.1 | 3876039 | 3876039 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3360 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CG | NC_133882.1 | 3876071 | 3876071 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3392 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CG | NC_133882.1 | 3876139 | 3876139 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3460 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
| CG | NC_133882.1 | 3876163 | 3876163 | 0.0 | Intron | NC_133882.1 | 3872679 | 3904773 | 32095 | 3484 | XP_074621372.1 | exocyst complex component 5-like isoform X3 | JBrowse |
