In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074622409.1
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13 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133886.1 | 4001768 | 4001768 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2846 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001786 | 4001786 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2828 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001793 | 4001793 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2821 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001828 | 4001828 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2786 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001830 | 4001830 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2784 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001832 | 4001832 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2782 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001846 | 4001846 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2768 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001849 | 4001849 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2765 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001851 | 4001851 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2763 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHH | NC_133886.1 | 4001865 | 4001865 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2749 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHG | NC_133886.1 | 4001790 | 4001790 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2824 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHG | NC_133886.1 | 4001799 | 4001799 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2815 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
| CHG | NC_133886.1 | 4001837 | 4001837 | 0.0 | Promoter | NC_133886.1 | 3982441 | 4004614 | 22174 | 2777 | XP_074622409.1 | cilia- and flagella-associated protein 221-like | JBrowse |
