In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074622941.1
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33 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133886.1 | 17418364 | 17418364 | 0.0 | Promoter | NC_133886.1 | 17415373 | 17422387 | 7015 | 2991 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418365 | 17418365 | 0.0 | Promoter | NC_133886.1 | 17415373 | 17422387 | 7015 | 2992 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418371 | 17418371 | 0.0 | Promoter | NC_133886.1 | 17415373 | 17422387 | 7015 | 2998 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418376 | 17418376 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3003 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418393 | 17418393 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3020 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418395 | 17418395 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3022 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418399 | 17418399 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3026 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418400 | 17418400 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3027 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418463 | 17418463 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3090 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418478 | 17418478 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3105 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418479 | 17418479 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3106 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418484 | 17418484 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3111 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418485 | 17418485 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3112 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418486 | 17418486 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3113 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418499 | 17418499 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3126 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418517 | 17418517 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3144 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418518 | 17418518 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3145 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418526 | 17418526 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3153 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418528 | 17418528 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3155 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418541 | 17418541 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3168 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418544 | 17418544 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3171 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418551 | 17418551 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3178 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418553 | 17418553 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3180 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418554 | 17418554 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3181 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418562 | 17418562 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3189 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418600 | 17418600 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3227 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHH | NC_133886.1 | 17418608 | 17418608 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3235 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHG | NC_133886.1 | 17418377 | 17418377 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3004 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHG | NC_133886.1 | 17418466 | 17418466 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3093 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHG | NC_133886.1 | 17418475 | 17418475 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3102 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHG | NC_133886.1 | 17418500 | 17418500 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3127 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CHG | NC_133886.1 | 17418530 | 17418530 | 0.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3157 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
| CG | NC_133886.1 | 17418494 | 17418494 | 1.0 | Intron | NC_133886.1 | 17415373 | 17422387 | 7015 | 3121 | XP_074622941.1 | prostaglandin E synthase 3-like | JBrowse |
