In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_3
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_3) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_3 •
Gene: XP_074623628.1
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33 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133886.1 | 9749776 | 9749776 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5569 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749791 | 9749791 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5584 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749792 | 9749792 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5585 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749796 | 9749796 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5589 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749798 | 9749798 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5591 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749800 | 9749800 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5593 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749824 | 9749824 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5617 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749843 | 9749843 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5636 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749851 | 9749851 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5644 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749854 | 9749854 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5647 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749861 | 9749861 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5654 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749863 | 9749863 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5656 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749864 | 9749864 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5657 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749866 | 9749866 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5659 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749870 | 9749870 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5663 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749877 | 9749877 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5670 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749878 | 9749878 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5671 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749887 | 9749887 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5680 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749898 | 9749898 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5691 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749900 | 9749900 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5693 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749905 | 9749905 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5698 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749906 | 9749906 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5699 | XP_074623628.1 | sacsin-like | JBrowse |
| CHH | NC_133886.1 | 9749909 | 9749909 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5702 | XP_074623628.1 | sacsin-like | JBrowse |
| CHG | NC_133886.1 | 9749817 | 9749817 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5610 | XP_074623628.1 | sacsin-like | JBrowse |
| CHG | NC_133886.1 | 9749841 | 9749841 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5634 | XP_074623628.1 | sacsin-like | JBrowse |
| CHG | NC_133886.1 | 9749850 | 9749850 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5643 | XP_074623628.1 | sacsin-like | JBrowse |
| CHG | NC_133886.1 | 9749875 | 9749875 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5668 | XP_074623628.1 | sacsin-like | JBrowse |
| CHG | NC_133886.1 | 9749890 | 9749890 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5683 | XP_074623628.1 | sacsin-like | JBrowse |
| CHG | NC_133886.1 | 9749913 | 9749913 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5706 | XP_074623628.1 | sacsin-like | JBrowse |
| CG | NC_133886.1 | 9749778 | 9749778 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5571 | XP_074623628.1 | sacsin-like | JBrowse |
| CG | NC_133886.1 | 9749834 | 9749834 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5627 | XP_074623628.1 | sacsin-like | JBrowse |
| CG | NC_133886.1 | 9749889 | 9749889 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5682 | XP_074623628.1 | sacsin-like | JBrowse |
| CG | NC_133886.1 | 9749902 | 9749902 | 0.0 | Intron | NC_133886.1 | 9744207 | 9790790 | 46584 | 5695 | XP_074623628.1 | sacsin-like | JBrowse |
