In this module, we provide information on three methylation motif types and associations with protein-coding genes. User can submit interested gene to obtain relevant information, including motif type, genomic location and related genes.
Visualization for the distribution of Bisulfite-Seq in Acropora palmata - Polyp_Underside_Control_2
The distribution of three methylation motif types in Acropora palmata
The distribution of three methylation motif types in different genomic elements in (Polyp_Underside_Control_2) in Acropora palmata
Query Parameters
Species: Acropora palmata •
Stage: •
Tissue: Polyp_Underside_Control_2 •
Gene: XP_074623984.1
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31 methylation records found
| Motif type | Chr/Scaffold/Contig | start | end | methylation level | peak location | Chr/Scaffold/Contig | geneStart | geneEnd | geneLength | distanceToTSS | Protein id | Description | Visualization |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHH | NC_133886.1 | 1283128 | 1283128 | 0.666666666666667 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2764 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283129 | 1283129 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2763 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283136 | 1283136 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2756 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283164 | 1283164 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2728 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283165 | 1283165 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2727 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283176 | 1283176 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2716 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283178 | 1283178 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2714 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283183 | 1283183 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2709 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283186 | 1283186 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2706 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283188 | 1283188 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2704 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283192 | 1283192 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2700 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283193 | 1283193 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2699 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283198 | 1283198 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2694 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283199 | 1283199 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2693 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283200 | 1283200 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2692 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283213 | 1283213 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2679 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283216 | 1283216 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2676 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283220 | 1283220 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2672 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283228 | 1283228 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2664 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283239 | 1283239 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2653 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283241 | 1283241 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2651 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHH | NC_133886.1 | 1283264 | 1283264 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2628 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHG | NC_133886.1 | 1283134 | 1283134 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2758 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHG | NC_133886.1 | 1283139 | 1283139 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2753 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHG | NC_133886.1 | 1283158 | 1283158 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2734 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHG | NC_133886.1 | 1283182 | 1283182 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2710 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHG | NC_133886.1 | 1283196 | 1283196 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2696 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CHG | NC_133886.1 | 1283207 | 1283207 | 0.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2685 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CG | NC_133886.1 | 1283144 | 1283144 | 1.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2748 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CG | NC_133886.1 | 1283161 | 1283161 | 1.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2731 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
| CG | NC_133886.1 | 1283204 | 1283204 | 1.0 | Promoter | NC_133886.1 | 1276028 | 1285892 | 9865 | 2688 | XP_074623984.1 | 5'-AMP-activated protein kinase subunit gamma-1-like isoform X2 | JBrowse |
